MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Lactobacillus murinus LAC.1

Change genome:

from a total of 52 genomes

Available tools:

Quick search:

(leave empty to show all)

PROKKA Genome Annotation:

contigs: 225

bases: 2,084,440 bps

CDS: 1,985

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 63

misc RNA:

Total features: 2,059

Total number of protein coding genes annotated/found: 1,985

Display 20 50 100 All items per page

Items 1 - 20

🡆

click arrow to navigate by page or

of 100 pages

Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5005\|JADGKI010000131.1	SEQF5005_01501	NA AA	129/43	131-259	hypothetical protein
SEQF5005\|JADGKI010000131.1	SEQF5005_01502	NA AA	471/157	1030-1500	Ribosome maturation factor RimP
SEQF5005\|JADGKI010000131.1	SEQF5005_01503	NA AA	1158/386	1530-2687	Transcription termination/antitermination protein NusA
SEQF5005\|JADGKI010000131.1	SEQF5005_01504	NA AA	300/100	2699-2998	hypothetical protein
SEQF5005\|JADGKI010000131.1	SEQF5005_01505	NA AA	354/118	2949-3302	hypothetical protein
SEQF5005\|JADGKI010000131.1	SEQF5005_01506	NA AA	2316/772	3375-5690	Translation initiation factor IF-2
SEQF5005\|JADGKI010000131.1	SEQF5005_01507	NA AA	366/122	5715-6080	Ribosome-binding factor A
SEQF5005\|JADGKI010000131.1	SEQF5005_01508	NA AA	906/302	6166-7071	tRNA pseudouridine synthase B
SEQF5005\|JADGKI010000131.1	SEQF5005_01509	NA AA	948/316	7086-8033	Bifunctional riboflavin kinase/FMN adenylyltransferase
SEQF5005\|JADGKI010000131.1	SEQF5005_01510	NA AA	1050/350	8101-9150	Heat-inducible transcription repressor HrcA
SEQF5005\|JADGKI010000131.1	SEQF5005_01511	NA AA	576/192	9180-9755	Protein GrpE
SEQF5005\|JADGKI010000131.1	SEQF5005_01512	NA AA	1845/615	9779-11623	Chaperone protein DnaK
SEQF5005\|JADGKI010000131.1	SEQF5005_01513	NA AA	1128/376	11752-12879	Chaperone protein DnaJ
SEQF5005\|JADGKI010000122.1	SEQF5005_00264	NA AA	1842/614	2190-349	Fatty acid ABC transporter ATP-binding/permease protein
SEQF5005\|JADGKI010000122.1	SEQF5005_00265	NA AA	1734/578	3923-2190	putative ABC transporter ATP-binding protein
SEQF5005\|JADGKI010000122.1	SEQF5005_00266	NA AA	774/258	4933-4160	hypothetical protein
SEQF5005\|JADGKI010000122.1	SEQF5005_00267	NA AA	525/175	5480-4956	putative protein YyaP
SEQF5005\|JADGKI010000122.1	SEQF5005_00268	NA AA	1746/582	7191-5446	hypothetical protein
SEQF5005\|JADGKI010000122.1	SEQF5005_00269	NA AA	1392/464	8733-7342	Fumarate reductase flavoprotein subunit
SEQF5005\|JADGKI010000122.1	SEQF5005_00270	NA AA	444/148	9434-8991	hypothetical protein

Items 1 - 20

🡆

click arrow to navigate by page or

of 100 pages

JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting

Page last updated: July 7, 2021 08:39:35